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METTL3 modulates colonic epithelium integrity via maintaining the self-renewal and differentiation of Lgr5+ stem cell
Chenbo Ding1,2,3 , Xinhui Yang4 , Hua Liu4 , Manolis Roulis3 , Huifang Chen2 , Yunzhu Chen2 , Hao Xu3 , Yimeng Gao5,6 , Jie Zhong4 , Hua-Bing Li1,2,3 , Youqiong Ye2 , Wei Cai7,* , Weiguo Hu7,* , Zhengting Wang4,*
1Institute of Immunological Innovation & Translation, Chongqing Medical University, Chongqing 400016, China
2Shanghai Institute of Immunology, State Key Laboratory of Oncogenes and Related Genes, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China
3Department of Immunobiology, Yale University School of Medicine, New Haven, CT 06520-8055, USA
4Department of Gastroenterology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China
5Section of Hematology, Yale Cancer Center and Department of Internal Medicine, Yale University School of Medicine, New Haven, CT 06520-8055, USA
6Institute for Regenerative Medicine, Shanghai East Hospital, School of Life Sciences and Technology, Tongji University, Shanghai 200123, China
7Department of General Surgery, Shanghai Minimally Invasive Surgery Center, Shanghai Institute of Immunology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China
*Correspondence to:Zhengting Wang , Email:zhengtingwang@shsmu.edu.cn Weiguo Hu , Email:wghu@rjh.com.cn Wei Cai , Email:caiwei@shsmu.edu.cn
J Mol Cell Biol, Volume 17, Issue 2, February 2025, mjae060,  https://doi.org/10.1093/jmcb/mjae060
Keyword: METTL3, Lgr5+ stem cell, intestinal development, inflammation, GRB10, IFRD1

The development and homeostasis of intestinal epithelium are mediated by actively proliferating Lgr5+ stem cells, which possess a remarkable self-renewal and differentiation capacity. Recently, our study demonstrated that N6-methyladenosine (m6A) methylation was essential for the survival of colonic stem cells. Here, we show that methyltransferase-like 3 (METTL3) expression is downregulated in the colon mucosa in ulcerative colitis (UC) patients and strongly associated with the differentiation and maturation of goblet cells during inflammation. In mice, depletion of Mettl3 significantly inhibits the self-renewal and differentiation of Lgr5+ stem cells, especially the differentiation and maturation of goblet cells, resulting in intestinal dysplasia and spontaneous inflammation. Mechanistically, Mettl3 deletion-mediated m6A loss facilitates the expression levels of growth factor receptor binding protein 10 (Grb10) and interferon-related developmental regulator 1 (Ifrd1) via increasing their messenger RNA stability. We further demonstrate that the levels of GRB10 and IFRD1 are negatively correlated with METTL3 level in UC samples. Collectively, our data indicate that METTL3 enhances the self-renewal and differentiation of Lgr5+ stem cells during intestinal development and inflammation, and thus it may be a potential therapeutic target for UC treatment.